ABOUT THIS RECORDspecies: Ancylostoma caninum
miRNA family: mir-1322
source: miRNEST
Taxonomy by NCBI:
Ancylostoma caninum Ancylostoma Ancylostomatinae Ancylostomatidae Ancylostomatoidea Strongylida Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTGCTGCTGCTGTTGCTGTC miRNA* CAGCTCGAAAGCGGCGTTTTG mismatches: 4 bulges: 2 |
pre-miRNA
GCTCCTCTGTAGTTGCTGCTGCTGTTGCTGTCGCTGCCTTATAACAAGTAGAAATCGTTGTTCGACCGTACAAAATGCCAATTTTCCAGCGGAAGCATGA
CGCTGCGACAGCTCGAAAGCGGCGTTTTGCAATAGTG
dot-bracket secondary structure
.......(((((.(((((((..((..((((((((.((.(((((((((..........)))))...((((..(((((....)))))...))))....))))
.)).)))))))).))..)))))))..)))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GCTCCTCTGTAGTTGCTGCTGCTGTTGCTGTCGCTGCCTTATAACAAGTAGAAATCGTTGTTCGACCGTACAAAATGCCAATTTTCCAGCGGAAGCATGA
CGCTGCGACAGCTCGAAAGCGGCGTTTTGCAATAGTG
dot-bracket secondary structure
.......(((((.(((((((..((..((((((((.((.(((((((((..........)))))...((((..(((((....)))))...))))....))))
.)).)))))))).))..)))))))..)))))......
SIMILARITIES| miRBase no hits PMRD ptc-miRf10957-akr: 0.000002 microPC no hits | UniProt no hits RFAM mir-598: 0.0005 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
