ABOUT THIS RECORDspecies: Ancylostoma caninum
miRNA family: miR-136
source: miRNEST
Taxonomy by NCBI:
Ancylostoma caninum Ancylostoma Ancylostomatinae Ancylostomatidae Ancylostomatoidea Strongylida Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATCATCGTCTCAAATGAGTCT miRNA* ACTCCATTTGTTTTGATGATGG mismatches: 3 bulges: 1 |
pre-miRNA
TTGTGGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGGATTCTTACGCTCCATCATCGTCTCAAATGAGTCTTCAGAGGGTTCTATCATT
dot-bracket secondary structure
).((((...((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).))))))))..)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGTGGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGGATTCTTACGCTCCATCATCGTCTCAAATGAGTCTTCAGAGGGTTCTATCATT
dot-bracket secondary structure
).((((...((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).))))))))..)))).
SIMILARITIES| miRBase oar-mir-136: 5.0E-46 PMRD no hits microPC no hits | UniProt no hits RFAM 6mir-136: 5.0E-40 | most similar mature miRNAs |
Identical with: ssc-mir-136 from miRBase (MNEST033988), eca-mir-136 from miRBase , cfa-mir-136 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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