ABOUT THIS RECORDspecies: Tetranychus urticae
miRNA family: mir-34
source: miRNEST
Taxonomy by NCBI:
Tetranychus urticae Tetranychus Tetranychidae Tetranychoidea Raphignathae Eleutherengona Anystina Prostigmata Trombidiformes Acariformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGCAGTGTGGTTAGCTGGT miRNA* CACTGATTGCACTGCCCATA mismatches: 0 bulges: 2 |
pre-miRNA
TTGCGATGTGTGGCAGTGTGGTTAGCTGGTTGTGTAATATAAACAACAACCACTGATTGCACTGCCCATACATCCGA
dot-bracket secondary structure
(((.(((((((((((((((((((((.(((((((............))))))))))))))))))).))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGCGATGTGTGGCAGTGTGGTTAGCTGGTTGTGTAATATAAACAACAACCACTGATTGCACTGCCCATACATCCGA
dot-bracket secondary structure
(((.(((((((((((((((((((((.(((((((............))))))))))))))))))).))))))))))))
SIMILARITIES| miRBase sko-mir-34: 0.00000006 PMRD no hits microPC no hits | UniProt no hits RFAM mir-449: 0.000001 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
