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ABOUT THIS RECORD

ID: MNEST008996
species: Fundulus heteroclitus
miRNA family: mir-147
source: miRNEST

Taxonomy by NCBI:
Fundulus heteroclitus Fundulus Fundulidae Cyprinodontoidei Cyprinodontiformes Atherinomorpha Smegmamorpha Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTGTGCGGAAATGCTTCTGC

miRNA*
AGAATCCTTTCTGCACAAACTA

mismatches: 3
bulges: 2

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pre-miRNA
CCCCCCCACCTCATCAGTCTAGCAGAATCCTTTCTGCACAAACTAGGACGCTTTGACACTCAGTGTGCGGAAATGCTTCTGCTCAACTGGTGGGGTTTCA
CC


dot-bracket secondary structure
.......(((((((((((..(((((((...(((((((((..(((.((...........)).))))))))))))...)))))))..)))))))))))....
..



SIMILARITIES
miRBase gga-mir-147-1: 0.000001

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-147: 7e-30
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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