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ABOUT THIS RECORD
ID:
MNEST008997
species:
Fundulus heteroclitus
miRNA family:
mir-31
source:
miRNEST
Taxonomy by NCBI:
Fundulus heteroclitus
Fundulus
Fundulidae
Cyprinodontoidei
Cyprinodontiformes
Atherinomorpha
Smegmamorpha
Percomorpha
Euacanthopterygii
Acanthopterygii
Holacanthopterygii
Euacanthomorpha
Acanthomorpha
Ctenosquamata
Eurypterygii
Neoteleostei
Neognathi
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGCAAGATGCTGGAATTGCA
miRNA*
TATTTCTGGCGAACCTGCCGAA
mismatches:
5
bulges:
1
View larger
pre-miRNA
GCTGAGGGATGAAGGAACAGGTCCTGTTAAATGTTGGAAACTAAACAAAGAAAGAACCCGCACGCTGGGACG
TATTTCTGGCGAACCTGCCGAA
AAGAAA
GGGCTTCTATAATCACCAAATAGG
CGGCAAGATGCTGGAATTGCA
AAACCGGTCAAAAACCGGAAGCAAAAAGTTCCACTCGAATTTGAAACCAGAAGCT
TTTGGGGACAAAAA
dot-bracket secondary structure
.....(((((..........)))))......((((........)))).........((((.....))))..(
((.((((((((....(((((..
......
((.............)).......
)))))...)))))))).))).
...(((((.....))))).......((((((.....))))))....(((((....
))))).........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record