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ABOUT THIS RECORD
ID:
MNEST009016
species:
Choristoneura fumiferana
miRNA family:
miR-2723
source:
miRNEST
Taxonomy by NCBI:
Choristoneura fumiferana
Choristoneura
Archipini
Tortricinae
Tortricidae
Tortricoidea
Apoditrysia
Ditrysia
Heteroneura
Neolepidoptera
Glossata
Lepidoptera
Amphiesmenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCAGCAGTGGACGTCTTTCGG
miRNA*
GGGAGACGAGCTGTCGGTA
mismatches:
2
bulges:
2
View larger
pre-miRNA
CGTCCGCGGACC
GGGAGACGAGCTGTCGGTA
GGCCTCCAACAAGATGGAGCGACGATCTGGTTAAAATCGCGGGATCGCGGTGGATGCAGCAAGCACAAG
CCCGGTCTGAGTGGAGAACCTCGGGGGAGGCCTATGT
CCAGCAGTGGACGTCTTTCGG
CTGACATGA
dot-bracket secondary structure
.(((...((.((
((((((((.(((((.((((
(((((((.....((.(((.......)))((((....((((.((((((.(((...(((.....)))...)
))))))))..))))..))))))...)))))))))...
)).)))))...))))))))))
)))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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