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ABOUT THIS RECORD
ID:
MNEST009037
species:
Sparus aurata
miRNA family:
miR-142
source:
miRNEST
Taxonomy by NCBI:
Sparus aurata
Sparus
Sparidae
Percoidei
Perciformes
Percomorpha
Euacanthopterygii
Acanthopterygii
Holacanthopterygii
Euacanthomorpha
Acanthomorpha
Ctenosquamata
Eurypterygii
Neoteleostei
Neognathi
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGTGTTTCCTACTTTATGGAT
miRNA*
CCATAAAGTAGAAAGCACTAC
mismatches:
2
bulges:
0
View larger
pre-miRNA
ACTGATGTACAGTGTTGTCAC
CCATAAAGTAGAAAGCACTAC
TAAACTTCACTACACAGTGT
AGTGTTTCCTACTTTATGGAT
GAGTATACTGTTGGCTG
C
dot-bracket secondary structure
........(((((((..(((.
(((((((((((.(((((((((
...(((.........)))))
))))))).))))))))))).)
))..)))))))......
.
SIMILARITIES
miRBase
fru-mir-142b
:
7e-30
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-142: 1e-46
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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