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ABOUT THIS RECORD

ID: MNEST009037
species: Sparus aurata
miRNA family: miR-142
source: miRNEST

Taxonomy by NCBI:
Sparus aurata Sparus Sparidae Percoidei Perciformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGTGTTTCCTACTTTATGGAT

miRNA*
CCATAAAGTAGAAAGCACTAC

mismatches: 2
bulges: 0

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pre-miRNA
ACTGATGTACAGTGTTGTCACCCATAAAGTAGAAAGCACTACTAAACTTCACTACACAGTGTAGTGTTTCCTACTTTATGGATGAGTATACTGTTGGCTG
C


dot-bracket secondary structure
........(((((((..(((.(((((((((((.(((((((((...(((.........)))))))))))).))))))))))).)))..)))))))......
.



SIMILARITIES
miRBase fru-mir-142b: 7e-30

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-142: 1e-46
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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