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ABOUT THIS RECORD

ID: MNEST009079
species: Crassostrea gigas
miRNA family: miR-2293
source: miRNEST

Taxonomy by NCBI:
Crassostrea gigas Crassostrea Ostreidae Ostreoidea Ostreoida Pteriomorphia Bivalvia Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCTGTTGTTGTTTTGTATTC

miRNA*
ATAACATCACAACCTATCGCATA

mismatches: 4
bulges: 2

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pre-miRNA
TCTGCAAATTGAATAACATCACAACCTATCGCATACATTTTCCTTTCCTTTTCAATTCAGCTGGNTCAGATTTTAACTCACTATTTGTGTTTAATCTATT
AAATTCAGCTCANTAGCTCAGCATCAGCTGAAGGCGCATCCATTTTTAATATTGTTGCTGTTGTTGTTTTGTATTCATACGCGCC


dot-bracket secondary structure
..(((....((((((.((..(((((..((.(((.(((.((...............(((((((((...(((((..(((.((.....)).))).)))))...
...((.((((....)))).))..)))))))))...............))...)))))).)).)))))..))))))))...)))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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