ABOUT THIS RECORDspecies: Biomphalaria glabrata
miRNA family: mir-34
source: miRNEST
Taxonomy by NCBI:
Biomphalaria glabrata Biomphalaria Planorbidae Lymnaeoidea Basommatophora Pulmonata Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGCAGTGTGGTTAGCTGGT miRNA* CACTCTCCACATTACCGCC mismatches: 3 bulges: 1 |
pre-miRNA
TTTAGTCTGTATCAAGCAGTCCCTGATTTTTTGGCAGTGTGGTTAGCTGGTTGTTTCTCCTGCAACAACCACTCTCCACATTACCGCCAAATCAGCCGACC
ATGCACCAGATAAT
dot-bracket secondary structure
)...(((((......((((((.(((((((..(((.(((((((..((.((((((((........))))))))))..))))))).)))..)))))))..))).
.)))..)))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTAGTCTGTATCAAGCAGTCCCTGATTTTTTGGCAGTGTGGTTAGCTGGTTGTTTCTCCTGCAACAACCACTCTCCACATTACCGCCAAATCAGCCGACC
ATGCACCAGATAAT
dot-bracket secondary structure
)...(((((......((((((.(((((((..(((.(((((((..((.((((((((........))))))))))..))))))).)))..)))))))..))).
.)))..)))))...
SIMILARITIES| miRBase dan-mir-34: 4.0E-7 PMRD no hits microPC no hits | UniProt no hits RFAM 9mir-449: 6.0E-6 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
