ABOUT THIS RECORDspecies: Pongo abelii
miRNA family: mir-720
source: miRNEST
Taxonomy by NCBI:
Pongo abelii Pongo Ponginae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTCGCTGCGGCCTCCACCTC miRNA* TGGAGTGCTGTGGTGCGGTCT mismatches: 3 bulges: 2 |
pre-miRNA
TTTTTGGGACAGTCTCTCTCTGCTGCTCAGGCTGGAGTGCTGTGGTGCGGTCTTGGCTCGCTGCGGCCTCCACCTCTTGGGTTCGGGTGATTCTCCTGCC
TTGGC
dot-bracket secondary structure
.....((((.((((....((((..(((((((.(((((.(((((((((.(((....)))))))))))))))))...))))))).)))).)))).))))((.
...))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTTTGGGACAGTCTCTCTCTGCTGCTCAGGCTGGAGTGCTGTGGTGCGGTCTTGGCTCGCTGCGGCCTCCACCTCTTGGGTTCGGGTGATTCTCCTGCC
TTGGC
dot-bracket secondary structure
.....((((.((((....((((..(((((((.(((((.(((((((((.(((....)))))))))))))))))...))))))).)))).)))).))))((.
...))
SIMILARITIES| miRBase ppy-mir-1273: 0.00002 PMRD no hits microPC no hits | UniProt sp|Q8N7M2|ZN283_HUMAN: 0.0001 RFAM Metazoa_SRP: 0.000000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
