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ABOUT THIS RECORD

ID: MNEST009159
species: Pongo abelii
miRNA family: mir-548
source: miRNEST

Taxonomy by NCBI:
Pongo abelii Pongo Ponginae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTTGGTGCAAAAGTAATTGCT

miRNA*
CAATTACTTTCACACCAATGT

mismatches: 3
bulges: 0

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pre-miRNA
TATTAGGTTGGTGCAAAAGTAATTGCTGTTTTTGCCATTAAAAGTAATGGCCACCCGCGTCCTAATGTAGGCCATGCTGCAATTACTTTCACACCAATGT
AAT


dot-bracket secondary structure
.((((.(((((((..(((((((((((.((....(((((((....))))))).))..((((((((...))))..)))).)))))))))))..))))))).)
)))



SIMILARITIES
miRBase hsa-mir-548i-1: 6e-18

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-548: 1e-16
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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