ABOUT THIS RECORDspecies: Pongo abelii
miRNA family: mir-147
source: miRNEST
Taxonomy by NCBI:
Pongo abelii Pongo Ponginae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGTGCGGAAATGCTTCTGC miRNA* GGAAACATTTCTGCACAAAC mismatches: 2 bulges: 0 |
pre-miRNA
TTTCTTCCGAAGAGTACTCTATAAATCTAGTGGAAACATTTCTGCACAAACTAGATTCTGGGCACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGGG
TTTGTCTACATTTTT
dot-bracket secondary structure
..........(((..((((((.((((.((((((((.((((((((((((..((((...)))).......)))))))))))).)))))))).)))).)))))
)...)))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TTTCTTCCGAAGAGTACTCTATAAATCTAGTGGAAACATTTCTGCACAAACTAGATTCTGGGCACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGGG
TTTGTCTACATTTTT
dot-bracket secondary structure
..........(((..((((((.((((.((((((((.((((((((((((..((((...)))).......)))))))))))).)))))))).)))).)))))
)...)))........
SIMILARITIES| miRBase hsa-mir-147b: 1e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-147: 5e-16 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
