ABOUT THIS RECORDspecies: Anemonia viridis
miRNA family: mir-33
source: miRNEST
Taxonomy by NCBI:
Anemonia viridis Anemonia Actiniidae Nynantheae Actiniaria Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATACATTGTTGTTGCATTGTA miRNA* CAGTGCGTTAGCATGTTACG mismatches: 3 bulges: 1 |
pre-miRNA
TTCCAATATTTACAGTGCGTTAGCATGTTACGGCATGACTCTGCTGTTTACCACGATCGTATGGATTCAAAAGTCTATATACAAAAAATGCTCCATGTAT
ACATTGTTGTTGCATTGTAATAAATCTT
dot-bracket secondary structure
.........((((((((((.((((((((....(((((.....((..(((.........(((((((((....)))))))))....)))..))..)))))..
))).))))).))))))))))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTCCAATATTTACAGTGCGTTAGCATGTTACGGCATGACTCTGCTGTTTACCACGATCGTATGGATTCAAAAGTCTATATACAAAAAATGCTCCATGTAT
ACATTGTTGTTGCATTGTAATAAATCTT
dot-bracket secondary structure
.........((((((((((.((((((((....(((((.....((..(((.........(((((((((....)))))))))....)))..))..)))))..
))).))))).))))))))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
