ABOUT THIS RECORDspecies: Penaeus monodon
miRNA family: miR-669n
source: miRNEST
Taxonomy by NCBI:
Penaeus monodon Penaeus Penaeidae Penaeoidea Dendrobranchiata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTTGTGTGTGTGTGTGTGTG miRNA* CGCACAATACACGCGTAAGA mismatches: 4 bulges: 1 |
pre-miRNA
CACTCAAGGCCTGCTCTCTAGACGCACAATACACGCGTAAGAAGGAAGAATATAGTCTTGAAGTCGCTCTGTGTACTTGGTGTGTGTGTTTGTATGATTG
TTTGTTTCTGTGTGTATTTGTGTGTGTGTGTGTGTGTGTGTTGTGTTGTGTTGGG
dot-bracket secondary structure
..(((((.((.(((....((.((((((((((((((((......(((((...((((((.((((..(((.(((......)))...)))..))))...)))))
)...))))).........))))))))).))))))).))....)))..)).)))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CACTCAAGGCCTGCTCTCTAGACGCACAATACACGCGTAAGAAGGAAGAATATAGTCTTGAAGTCGCTCTGTGTACTTGGTGTGTGTGTTTGTATGATTG
TTTGTTTCTGTGTGTATTTGTGTGTGTGTGTGTGTGTGTGTTGTGTTGTGTTGGG
dot-bracket secondary structure
..(((((.((.(((....((.((((((((((((((((......(((((...((((((.((((..(((.(((......)))...)))..))))...)))))
)...))))).........))))))))).))))))).))....)))..)).)))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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