ABOUT THIS RECORDspecies: Penaeus monodon
miRNA family: miR-2444
source: miRNEST
Taxonomy by NCBI:
Penaeus monodon Penaeus Penaeidae Penaeoidea Dendrobranchiata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGTTTTGTTTTTTGTTTTT miRNA* GAAGAAAAAAAAAAGAAAAAAA mismatches: 3 bulges: 1 |
pre-miRNA
AGTAGAGTTGTTGTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTTCCCCTATCAGTGCATTATTGGATGACCAAATGCGAATGGAAGAATGTTCTTTTAG
ACTAAGAATTTACCTAAATCAAAAAAAGAAGAAAAAAAAAAGAAAAAAAGAAAAACAGCAACAACAA
dot-bracket secondary structure
......(((((((((((((.((((.((((.((((((.((((((((...((.(((.((((((..(((....)))))))))..))).))..((....(((((
.............))))).)).)))))))).)))))).))))..)))).))))))))))))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AGTAGAGTTGTTGTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTTCCCCTATCAGTGCATTATTGGATGACCAAATGCGAATGGAAGAATGTTCTTTTAG
ACTAAGAATTTACCTAAATCAAAAAAAGAAGAAAAAAAAAAGAAAAAAAGAAAAACAGCAACAACAA
dot-bracket secondary structure
......(((((((((((((.((((.((((.((((((.((((((((...((.(((.((((((..(((....)))))))))..))).))..((....(((((
.............))))).)).)))))))).)))))).))))..)))).))))))))))))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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