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ABOUT THIS RECORD
ID:
MNEST009240
species:
Pristionchus pacificus
miRNA family:
miR-971
source:
miRNEST
Taxonomy by NCBI:
Pristionchus pacificus
Pristionchus
Neodiplogasteridae
Diplogasterida
Chromadorea
Nematoda
Pseudocoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGTGGTCATCCTTACAGTC
miRNA*
CTTAAGATTGATTAAGGCT
mismatches:
4
bulges:
2
View larger
pre-miRNA
ACCTGGACAAACAAGTAACGTCGCTTCGGATTAATGTTGATTAAGGCGCCTG
CTTAAGATTGATTAAGGCT
GAATAGATAAGGTTCTTCCGTATTGCAGA
CCTGGTTGATG
TTGGTGGTCATCCTTACAGTC
ACCGCCTTCTCACTCATCTCCCTGTATACGTCGCTCGTTTCGGTATTTG
dot-bracket secondary structure
(((.....((((.(((.((((.((...(((...(((.(((..((((((...(
((((((..((((((.(((.
.....(((.(((((.............))
))).)))...)
))..))))))..)))).))).
..)))))).)))..))).)))..))..)))).))).)))).))).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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