ABOUT THIS RECORDspecies: Pristionchus pacificus
miRNA family: miR-2463
source: miRNEST
Taxonomy by NCBI:
Pristionchus pacificus Pristionchus Neodiplogasteridae Diplogasterida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTCACGTGGTGGAAATGTCG miRNA* TCATTTCCTCCCCGAGAAGAT mismatches: 4 bulges: 0 |
pre-miRNA
AGAGAAAGGGTCTTCACGTGGTGGAAATGTCGCCGTCTCGTCATTTCCTCCCCGAGAAGATCGCATCGC
dot-bracket secondary structure
........(((((((.((.((.(((((((.((......)).))))))).)).)).))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGAGAAAGGGTCTTCACGTGGTGGAAATGTCGCCGTCTCGTCATTTCCTCCCCGAGAAGATCGCATCGC
dot-bracket secondary structure
........(((((((.((.((.(((((((.((......)).))))))).)).)).))))))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q93425|RT05_CAEEL: 0.0004 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
