ABOUT THIS RECORDspecies: Equus caballus
miRNA family: mir-1322
source: miRNEST
Taxonomy by NCBI:
Equus caballus Equus subg. Equus Equus Equidae Perissodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTGCTGCTGCTGCTGCTGCT miRNA* TGGCGCCAGCCTGGAGCCC mismatches: 3 bulges: 2 |
pre-miRNA
CCAGCCACAGGCATGAGGGGCCCCCGGCCGAGATGATAGTGCTGGCGCCAGCCTGGAGCCCAACTACCTCGCTGCTGCTGCTGCTGCTGCTGCTGCTCAG
CCCCGGCCTCCGCGGGAGCCCCGACTGCTC
dot-bracket secondary structure
...(((...)))....((((((((.(((((...((((((((.(((((.((((.((((((...........))).)))..)))).))))).))))).))).
...))))).....))).)))))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CCAGCCACAGGCATGAGGGGCCCCCGGCCGAGATGATAGTGCTGGCGCCAGCCTGGAGCCCAACTACCTCGCTGCTGCTGCTGCTGCTGCTGCTGCTCAG
CCCCGGCCTCCGCGGGAGCCCCGACTGCTC
dot-bracket secondary structure
...(((...)))....((((((((.(((((...((((((((.(((((.((((.((((((...........))).)))..)))).))))).))))).))).
...))))).....))).)))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
