ABOUT THIS RECORDspecies: Macaca nemestrina
miRNA family: miR-1285
source: miRNEST
Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGGGCAACACAGTGAGACCC miRNA* GGATCACGTGAGTCCAGAA mismatches: 3 bulges: 2 |
pre-miRNA
GCTGAGGCAAGGGGATCACGTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACTGCACTCTAGCCTGGGCAACACAGTGAGACCCTGATCCA
AA
dot-bracket secondary structure
.....((..((((..(((((((.((((((..(((....(((((((....)))))))...)))((......))))))))..))).))))..))))...)).
..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCTGAGGCAAGGGGATCACGTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACTGCACTCTAGCCTGGGCAACACAGTGAGACCCTGATCCA
AA
dot-bracket secondary structure
.....((..((((..(((((((.((((((..(((....(((((((....)))))))...)))((......))))))))..))).))))..))))...)).
..
SIMILARITIES| miRBase ssc-mir-1285: 0.0003 PMRD no hits microPC no hits | UniProt no hits RFAM Metazoa_SRP: 0.00000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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