ABOUT THIS RECORDspecies: Macaca nemestrina
miRNA family: mir-1268
source: miRNEST
Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGGCGTGGTGGCGGGCGCCT miRNA* GAGTTCGAGACCAGCCTGGC mismatches: 3 bulges: 1 |
pre-miRNA
AACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACACAGCGAAATCCCACCTCTACTGAAAATACAAAAGTTAGCCAGGCGTGGTGGCGGGCGCCTGTA
ATCCCA
dot-bracket secondary structure
)......((.((((.(((((..(((((((((((.(((..................................))).))))))).))))..))))).))))..
..))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACACAGCGAAATCCCACCTCTACTGAAAATACAAAAGTTAGCCAGGCGTGGTGGCGGGCGCCTGTA
ATCCCA
dot-bracket secondary structure
)......((.((((.(((((..(((((((((((.(((..................................))).))))))).))))..))))).))))..
..))..
SIMILARITIES| miRBase hsa-mir-5096: 9.0E-11 PMRD no hits microPC no hits | UniProt sp|Q96MD7|CI085_HUMAN: 5.0E-7 RFAM PMetazoa_SRP: 1.0E-25 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
