miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST009409
species: Esox lucius
miRNA family: mir-341
source: miRNEST

Taxonomy by NCBI:
Esox lucius Esox Esocidae Esociformes Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGTCGGTCGGTCGGTCGGT

miRNA*
GATCGATTTTTCTTTGACC

mismatches: 5
bulges: 1

View larger
pre-miRNA
GGGGGGGTCGGTCGGTCGGTCGGTCGGTGGTCTCTATGAACAAAACTAGTTTGTTACCCAGAGAGGTTTCGGGGAGAAGCTGTTTTTTTGCTGAGGTAAC
TTGAGTTTAGATAAAATGGACCCTAAGGGAGTGAGACTTGAGTGTAGACTAGTAGGAAAACAAAACGTACATTTAGGTATGTAACGAGATCGATTTTTCT
TTGACC
TTTT


dot-bracket secondary structure
..(((((((((..((..((((((((..((.(((((...((((((.....))))))....)))))((((((.....))))))(((((((((((..(((.((
((((((((.......((...(((...))).)).))))))))))....))))))))))))))...((((((......))))))..)).))))))))..)).
))))))
))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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