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ABOUT THIS RECORD

ID: MNEST009414
species: Esox lucius
miRNA family: mir-133
source: miRNEST

Taxonomy by NCBI:
Esox lucius Esox Esocidae Esociformes Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGGTCCCCTTCAACCAGCT

miRNA*
CTGGTAAAAAGGAACCAAATC

mismatches: 4
bulges: 0

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pre-miRNA
ACCCACAAGGCTTTGCTAAAGCTGGTAAAAAGGAACCAAATCACCTCTTGGATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCTTTGATGA

dot-bracket secondary structure
.....((((((...((((.(((((((..((.((.((((((((.((....))...)))))))).)).))..))))))).))))...))))))....


SIMILARITIES
miRBase dre-mir-133a-1: 1e-37

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-133: 3e-23
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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