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ABOUT THIS RECORD
ID:
MNEST009430
species:
Caligus rogercresseyi
miRNA family:
miR-2189
source:
miRNEST
Taxonomy by NCBI:
Caligus rogercresseyi
Caligus
Caligidae
Siphonostomatoida
Podoplea
Neocopepoda
Copepoda
Maxillopoda
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGATTATTTGAATCAGCTGTG
miRNA*
CAGCTCATTCAAATTATCTAA
mismatches:
5
bulges:
0
View larger
pre-miRNA
CAAACTCTGTCCT
CAGCTCATTCAAATTATCTAA
ACTTGG
TGATTATTTGAATCAGCTGTG
TAGTGCTAGG
dot-bracket secondary structure
....((..((.((
(((((.((((((((.(((...
......
.))).)))))))).)))))..
.)).)).)).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record