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ABOUT THIS RECORD
ID:
MNEST009467
species:
Rana catesbeiana
miRNA family:
miR-2542
source:
miRNEST
Taxonomy by NCBI:
Rana catesbeiana
Aquarana
Aquarana/sylvatica group
Novirana
Rana
Raninae
Ranidae
Ranoidea
Neobatrachia
Anura
Batrachia
Amphibia
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGATGTTTTCAGCATAAATA
miRNA*
TTTGTGACTGAAACACTTCTTCT
mismatches:
4
bulges:
2
View larger
pre-miRNA
CACAATTTCCTCT
TTTGTGACTGAAACACTTCTTCT
CACTTGTACATCTGTTGTAATTACGATTTTGAATGTTTACACTTTAAACTTTAATTTGTTTTCA
CAACAAACTAAAATGCAAA
TAGATGTTTTCAGCATAAATA
AATCTCTTTT
dot-bracket secondary structure
.............
((((((.((((((.((.(((...
...(((((....((((((....((((..(((((.(((((.....)))))))))).))))....)
)))))........))))).
.))).))))))))))))))..
..........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record