ABOUT THIS RECORDspecies: Cynops pyrrhogaster
miRNA family: mir-1281
source: miRNEST
Taxonomy by NCBI:
Cynops pyrrhogaster Cynops Salamandridae Salamandroidea Caudata Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCGCCTCCCCCTCTCCCGTCA miRNA* ATGGGGAAGAGGAGGTGGGT mismatches: 2 bulges: 1 |
pre-miRNA
GGCATGATGGGGAAGAGGAGGTGGGTCCAAGACAGACAGCTGGCTTCAAGAAGGAGAAAAGAAACTTACCCCCTCTGCCCTCAATACCGCCTCCCCCTCT
CCCGTCATCC
dot-bracket secondary structure
((.(((((((((.((.((((((((.((.(((.(((....))).)))...))..(((...(((...........)))...)))....))))))))..)).)
))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GGCATGATGGGGAAGAGGAGGTGGGTCCAAGACAGACAGCTGGCTTCAAGAAGGAGAAAAGAAACTTACCCCCTCTGCCCTCAATACCGCCTCCCCCTCT
CCCGTCATCC
dot-bracket secondary structure
((.(((((((((.((.((((((((.((.(((.(((....))).)))...))..(((...(((...........)))...)))....))))))))..)).)
))))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
