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ABOUT THIS RECORD
ID:
MNEST009598
species:
Lumbricus rubellus
miRNA family:
miR-2548
source:
miRNEST
Taxonomy by NCBI:
Lumbricus rubellus
Lumbricus
Lumbricidae
Lumbricina
Haplotaxida
Oligochaeta
Clitellata
Annelida
Annelida/Echiura/Pogonophora group
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGTGGATTTACTGTTGCAAT
miRNA*
TGCATCGGTGCAATCTGCCTGC
mismatches:
3
bulges:
1
View larger
pre-miRNA
AGTATTAGCGATTGTCGCCAT
TGGTGGATTTACTGTTGCAAT
TTGCATCGCGGTCATT
TGCATCGGTGCAATCTGCCTGC
GACGCTTTAATCGGAAGA
dot-bracket secondary structure
.((....))....(((((...
.(((((((((((((.(((((.
((((...))))....)
)))).))))).)))))))).))
))).((((.....)))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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