ABOUT THIS RECORD

ID: MNEST009610
species: Cavia porcellus
miRNA family: miR-3195
source: miRNEST

Taxonomy by NCBI:
Cavia porcellus Cavia Caviidae Hystricognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
GTACGGAAGACCCACTCCCCGGCGCCGCTCGTGGGGGGCCCAAGTCCTTCTGATCGATGCCCAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGGCG
CGCCGGGTCCGGGTCTTCCCGGAGTCGG

dot-bracket secondary structure
)...(((((((((....((((((((.(((....(((((((.....((.((.....)).(((..(((((....))).))..))).))....)))))))))))
)))))))...))))))))).........


SIMILARITIES

miRBase mmu-mir-5105: 9.0E-33 PMRD no hits microPC no hits

UniProt no hits RFAM aSSU_rRNA_eukarya: 4.0E-60

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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