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ABOUT THIS RECORD
ID:
MNEST009614
species:
Cavia porcellus
miRNA family:
miR-1346
source:
miRNEST
Taxonomy by NCBI:
Cavia porcellus
Cavia
Caviidae
Hystricognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTGGGCTGGGGGCGGGGGAGG
miRNA*
TCCTCACCCCCCCTTCCACTC
mismatches:
4
bulges:
0
View larger
pre-miRNA
CGCGCGTGTGG
GTGGGCTGGGGGCGGGGGAGG
GGAGAGGAGAGACGAAACCGCTTTGAAAAAATGCAGTGATTCCATTCCTCTGTGTTGCCCACC
TCCTC
ACCCCCCCTTCCACTC
TGCCTCCT
dot-bracket secondary structure
...((....((
(((((..(((((..(((((((
(((((((((.......((.(((((....))).)).)).......))))))).......)).))
)))))
..)))))..)))))))
.)).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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