ABOUT THIS RECORDspecies: Cavia porcellus
miRNA family: mir-1195
source: miRNEST
Taxonomy by NCBI:
Cavia porcellus Cavia Caviidae Hystricognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGTTCAAGGCCAGCCTGAA miRNA* TGAGGCCAGCCTGGGCTACAA mismatches: 4 bulges: 2 |
pre-miRNA
TTTTCAGTGAGTTTGAGGCCAGCCTGGGCTACAAAGTGAGTTCAAGGCCAGCCTGAACTGCATAGT
dot-bracket secondary structure
).....((((((((.((((..(((((((((........))))).))))..))))))))).)))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTTCAGTGAGTTTGAGGCCAGCCTGGGCTACAAAGTGAGTTCAAGGCCAGCCTGAACTGCATAGT
dot-bracket secondary structure
).....((((((((.((((..(((((((((........))))).))))..))))))))).)))...
SIMILARITIES| miRBase hsa-mir-1285-1: 7.0E-7 PMRD no hits microPC no hits | UniProt no hits RFAM pIRES_Bip: 2.0E-13 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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