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ABOUT THIS RECORD
ID:
MNEST009651
species:
Rutilus rutilus
miRNA family:
mir-617
source:
miRNEST
Taxonomy by NCBI:
Rutilus rutilus
Rutilus
Cyprinidae
Cyprinoidea
Cypriniformes
Cypriniphysi
Otophysi
Ostariophysi
Otocephala
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGACTTCTCTTTTGAAGGTGA
miRNA*
AGTGTCAGGAGAAGAGTCTAA
mismatches:
4
bulges:
0
View larger
pre-miRNA
AGGTCCCATTTC
AGTGTCAGGAGAAGAGTCTAA
CGCACACCAGTGCAGAGGAGATCATGAGGAAAATCAAACAAGG
AGACTTCTCTTTTGAAGGTGA
AGC
CTGGAG
dot-bracket secondary structure
...(((..((((
(...((((((((.((((((..
.((((....)))).((.....)).(((......))).......
)))))).))))))))...)))
)).
..))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q5F3L1|KS6A5_CHICK: 0.00000002
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record