ABOUT THIS RECORD

ID: MNEST009710
species: Lonchura striata domestica
miRNA family: mir-3556
source: miRNEST

Taxonomy by NCBI:
Lonchura striata domestica Lonchura striata Lonchura Estrildinae Estrildidae Passeroidea Passeriformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
AGCAGCAATCGAACGAGCTCACGATGTCAGATGGTGCTGTCGTGACCATCACAGCTCCAGTGAACATGAATGTAGACAGCCTGCAGTCCTTGTCCTCAGA
TGGTGCCACCCCTGGCTGTGCAGCAGGTGATGATGGCAGGGCAGANCGAGGACGAGTCCGTGGACAGCGNCGANGACGACGGCGGAAACCTCTCGACAGC
A

dot-bracket secondary structure
....((..((((..(((.((.((.((((...((.(((((((.((.((((((..((.(((.((((((.((.(((((.....))))).))..)))..)))..
))).))((((....(((....))).)))).))))))))..((.((.((....))..)).)).))))))).))..)))).))...))...)))))))..))
.


SIMILARITIES

miRBase no hits PMRD no hits microPC no hits

UniProt sp|P55347|PKNX1_HUMAN: 0.0000000001 RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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