ABOUT THIS RECORDspecies: Carcinus maenas
miRNA family: mir-46
source: miRNEST
Taxonomy by NCBI:
Carcinus maenas Carcinus Portunidae Portunoidea Heterotremata Heterotremata/Thoracotremata group Eubrachyura Brachyura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGAGAGCTATCCGTCGACAG miRNA* GTCATGGAGTTGCTCTCTTTA mismatches: 2 bulges: 2 |
pre-miRNA
GTCTGCACTATCAAGAGAGCTATCCGTCGACAGTACTGGAGCCAAACAACTGTCATGGAGTTGCTCTCTTTATGGACAGGC
dot-bracket secondary structure
(((((..((((.((((((((..(((((.((((((..((........)))))))))))))...)))))))).)))).)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTCTGCACTATCAAGAGAGCTATCCGTCGACAGTACTGGAGCCAAACAACTGTCATGGAGTTGCTCTCTTTATGGACAGGC
dot-bracket secondary structure
(((((..((((.((((((((..(((((.((((((..((........)))))))))))))...)))))))).)))).)))))
SIMILARITIES| miRBase bmo-mir-281: 0.000000000001 PMRD no hits microPC no hits | UniProt no hits RFAM mir-281: 0.000001 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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