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ABOUT THIS RECORD
ID:
MNEST009774
species:
Peromyscus polionotus subgriseus
miRNA family:
miR-1603
source:
miRNEST
Taxonomy by NCBI:
Peromyscus polionotus subgriseus
Peromyscus polionotus
Peromyscus
Neotominae
Cricetidae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTGTTTTGTTTTGTGTTTTGT
miRNA*
AAGACACCAGGAAGCAGCT
mismatches:
4
bulges:
2
View larger
pre-miRNA
GTACCCAGAAGAGAAGGATGTG
AAGACACCAGGAAGCAGCT
CTCCTCAGAGTTGGATAGAATTTGTTATGAA
GTGTTTTGTTTTGTGTTTTGT
TCTTTTA
TGATCTTCGTTG
dot-bracket secondary structure
.......(((((((((((....
(((((((.((((((((..(
(....((((.((.....)).))))....)).
.))))))..)).)))))))..
)))))).
...)))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record