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ABOUT THIS RECORD
ID:
MNEST009784
species:
Oncorhynchus tshawytscha
miRNA family:
miR-2345
source:
miRNEST
Taxonomy by NCBI:
Oncorhynchus tshawytscha
Oncorhynchus
Salmoninae
Salmonidae
Salmonoidei
Salmoniformes
Protacanthopterygii
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTTGTGTTTTTTATTATTTCC
miRNA*
GAACAGTAGCAGACCTAACTT
mismatches:
5
bulges:
0
View larger
pre-miRNA
ACTAGATGAA
GTTGTGTTTTTTATTATTTCC
CATCACCATAAATCATATTTAATCACT
GAACAGTAGCAGACCTAACTT
CATCTGT
dot-bracket secondary structure
..((((((((
((((.((((.(((((.(((..
...........................
))).))))).)))).))))))
)))))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record