ABOUT THIS RECORDspecies: Spadella cephaloptera
miRNA family: miR-2444
source: miRNEST
Taxonomy by NCBI:
Spadella cephaloptera Spadella Spadellidae Phragmophora Chaetognatha Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGGGTTGTTTTTTTTTTTT miRNA* GAAAAAGAAACGATTAAAGAA mismatches: 1 bulges: 0 |
pre-miRNA
CGAACGATTGGTTTGGGTTGTTTTTTTTTTTTGGTGATAGTTTTTTTATTCAGGCAGATTAGAAATAGGACGTTGCGTAGACGACCCCGGGATGACACTC
CCGGATAAAGACAAAAGTTCATTCAACGGAAATTTCGAAACGAAAAAAAAATGTCAAGGAGGAAAAAGAAACGATTAAAGAAGATTGGAT
dot-bracket secondary structure
....(((((..(((.(((((((((((((((((..(((((.(((((((.(((..((((.(((....)))....))))((........((((((......))
))))......)).(((.(((........))).))).)))...)))))))..)))))...))))))))))))))))).)))..)))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGAACGATTGGTTTGGGTTGTTTTTTTTTTTTGGTGATAGTTTTTTTATTCAGGCAGATTAGAAATAGGACGTTGCGTAGACGACCCCGGGATGACACTC
CCGGATAAAGACAAAAGTTCATTCAACGGAAATTTCGAAACGAAAAAAAAATGTCAAGGAGGAAAAAGAAACGATTAAAGAAGATTGGAT
dot-bracket secondary structure
....(((((..(((.(((((((((((((((((..(((((.(((((((.(((..((((.(((....)))....))))((........((((((......))
))))......)).(((.(((........))).))).)))...)))))))..)))))...))))))))))))))))).)))..)))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
