ABOUT THIS RECORDspecies: Lymnaea stagnalis
miRNA family: miR-1603
source: miRNEST
Taxonomy by NCBI:
Lymnaea stagnalis Lymnaea Lymnaeidae Lymnaeoidea Basommatophora Pulmonata Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGGTTTGGTTTGTTTTTTTT miRNA* AAAAACGAAACAAGCTATTCAA mismatches: 3 bulges: 2 |
pre-miRNA
CTAAGTTTCGATAAAAACGAAACAAGCTATTCAAACCATCTATTTTTATAGCAAAGAGGGCTGACGTTAAATTTTCAGCTGCTGTGTCACACATATGTTG
GTTTGTGGTTTGGTTTGTTTTTTTTCGACTTCAG
dot-bracket secondary structure
.......((((.(((((((((.(((((((..(((((((..(((.......(((.((..((((((..........)))))).)).))).......))).))
)))))))))))).)))))))))..))))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTAAGTTTCGATAAAAACGAAACAAGCTATTCAAACCATCTATTTTTATAGCAAAGAGGGCTGACGTTAAATTTTCAGCTGCTGTGTCACACATATGTTG
GTTTGTGGTTTGGTTTGTTTTTTTTCGACTTCAG
dot-bracket secondary structure
.......((((.(((((((((.(((((((..(((((((..(((.......(((.((..((((((..........)))))).)).))).......))).))
)))))))))))).)))))))))..))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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