ABOUT THIS RECORDspecies: Lymnaea stagnalis
miRNA family: miR-3526
source: miRNEST
Taxonomy by NCBI:
Lymnaea stagnalis Lymnaea Lymnaeidae Lymnaeoidea Basommatophora Pulmonata Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGAAGATGAAGTTGTTTTTG miRNA* GAGATGGGTTCAATCACAAGCC mismatches: 5 bulges: 1 |
pre-miRNA
GATAGTAGAGGTTGAAGATGAAGTTGTTTTTGAAAAAGAAAGGCCTGTTTATGAAAGACCTGTACCAAGTGGTGCAACATATTTTCTCGAGCCATTTGAT
ACAAGGGCTGAATTTTTAAAGAGATGGGTTCAATCACAAGCCAAAAAAGA
dot-bracket secondary structure
.........((((...((((((.((((((((.(((((....(((((((((.....)))).((((.((((((((.................)))))))).)
))).)))))...)))))..)))))))).))).)))...))))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GATAGTAGAGGTTGAAGATGAAGTTGTTTTTGAAAAAGAAAGGCCTGTTTATGAAAGACCTGTACCAAGTGGTGCAACATATTTTCTCGAGCCATTTGAT
ACAAGGGCTGAATTTTTAAAGAGATGGGTTCAATCACAAGCCAAAAAAGA
dot-bracket secondary structure
.........((((...((((((.((((((((.(((((....(((((((((.....)))).((((.((((((((.................)))))))).)
))).)))))...)))))..)))))))).))).)))...))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
