ABOUT THIS RECORDspecies: Strongyloides stercoralis
miRNA family: miR-1725
source: miRNEST
Taxonomy by NCBI:
Strongyloides stercoralis Strongyloides Strongyloididae Panagrolaimoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATGATATAATTAGAGCTGAT miRNA* CACTTCTGACTGTAGTAATATT mismatches: 5 bulges: 1 |
pre-miRNA
TATATAAGATGTATGACGCTACAGTGTCATCATTCAATTTTAATGGAACACTCACTTCTGACTGTAGTAATATTGGTATAGAAGAAATGGATGAATATGA
TATAATTAGAGCTGATAGGATAAGAAAATTTATGTTTCCTGAATTTTCTATAGATTCAGGATTTG
dot-bracket secondary structure
.......((((.(((((((....))))))))))).................(((.((((((.((((...(((((.((.((.......)).)).)))))..
)))).)))))).)))....(((((....)))))...((((((((((.....))))))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TATATAAGATGTATGACGCTACAGTGTCATCATTCAATTTTAATGGAACACTCACTTCTGACTGTAGTAATATTGGTATAGAAGAAATGGATGAATATGA
TATAATTAGAGCTGATAGGATAAGAAAATTTATGTTTCCTGAATTTTCTATAGATTCAGGATTTG
dot-bracket secondary structure
.......((((.(((((((....))))))))))).................(((.((((((.((((...(((((.((.((.......)).)).)))))..
)))).)))))).)))....(((((....)))))...((((((((((.....))))))))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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