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ABOUT THIS RECORD
ID:
MNEST009840
species:
Oncorhynchus nerka
miRNA family:
miR-3906
source:
miRNEST
Taxonomy by NCBI:
Oncorhynchus nerka
Oncorhynchus
Salmoninae
Salmonidae
Salmonoidei
Salmoniformes
Protacanthopterygii
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAAAGCATTTTAAATGGAGAT
miRNA*
CTCCANTTGAGGTTGTGTTTTA
mismatches:
5
bulges:
1
View larger
pre-miRNA
GACACACATTGATGTGCCTAATCCTGGACTA
AAAAGCATTTTAAATGGAGAT
T
CTCCANTTGAGGTTGTGTTTTA
CTCCAGGATTAGGCTTAATCTGTGA
CCA
dot-bracket secondary structure
..((((.(((((...(((((((((((((.((
(((.(((.(((((.(((((..
.
))))).)))))..))).)))))
.)))))))))))))))))).)))).
...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record