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ABOUT THIS RECORD
ID:
MNEST009858
species:
Thymallus thymallus
miRNA family:
miR-2580
source:
miRNEST
Taxonomy by NCBI:
Thymallus thymallus
Thymallus
Thymallinae
Salmonidae
Salmonoidei
Salmoniformes
Protacanthopterygii
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGTGTCTGTCTGTATTTTGCT
miRNA*
TGGGCTATTCACAGATAATAGCA
mismatches:
4
bulges:
2
View larger
pre-miRNA
CATTTCACACAG
TGGGCTATTCACAGATAATAGCA
TAGCCTTTAGCCAACGTATCCACCTAAACAAAGGTACACAACATAATATAAAAGTCTG
CGTGTCT
GTCTGTATTTTGCT
GTGGGTTCG
dot-bracket secondary structure
.......(((((
((((.(((..(((((((...(((
..((.((((............((((......)))).............)))).)).))
).)))))
))..))).))))))
)))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record