miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST009882
species:
Coregonus clupeaformis
miRNA family:
miR-1638
source:
miRNEST
Taxonomy by NCBI:
Coregonus clupeaformis
Coregonus
Coregoninae
Salmonidae
Salmonoidei
Salmoniformes
Protacanthopterygii
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTATTTTGTGTTTTTTGTTTT
miRNA*
AAGGATGATTAAGAATCACGA
mismatches:
4
bulges:
2
View larger
pre-miRNA
GACTCGTTGATATTGATTCTT
GTATTTTGTGTTTTTTGTTTT
GTTTGGCAGATGTATCATGTGCAGCGTAGCCTACGG
AAGGATGATTAAGAATCACGA
A
GAATATGTACATTAGAG
dot-bracket secondary structure
..(((..((.(((..((((((
(((((((..(((..((.((((
((..(((...(((((...))))).....))).))))
)).)).)))..))))).)).)
)
))))..)))))...)))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record