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ABOUT THIS RECORD
ID:
MNEST009898
species:
Salvelinus fontinalis
miRNA family:
miR-1279
source:
miRNEST
Taxonomy by NCBI:
Salvelinus fontinalis
Salvelinus
Salmoninae
Salmonidae
Salmonoidei
Salmoniformes
Protacanthopterygii
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATATTGCTTCTTGGTTTAT
miRNA*
GAAAAAAAGGGGGAGTATCATA
mismatches:
5
bulges:
1
View larger
pre-miRNA
GATATGTTTATT
GAAAAAAAGGGGGAGTATCATA
TAGGTA
TCATATTGCTTCTTGGTTTAT
ACAAACACA
dot-bracket secondary structure
....(((((..(
(((...((((((.(((((.(((
....))
).))))).))))))..)))).
..)))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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