ABOUT THIS RECORD

ID: MNEST009899
species: Salvelinus fontinalis
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Salvelinus fontinalis Salvelinus Salmoninae Salmonidae Salmonoidei Salmoniformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
GGGGTGAACTTCGAGGCCCTGATCATCGCCATGGCAGTGTTAGGCGGGACTATCATCATCAGCATCACAGTCTGTTGCTGCTGCTGCTGTTGCTGCAAGAA
ACGTCAATCAAGGCCAGACAGAGATGAGGAGAGGTTTGCCAGGAG

dot-bracket secondary structure
).((((((((((.....(((.(((.((....((((..((...((((...((..((.((.(((((.((((((.....)))).)).))))).)).))..))..
.))))...))..))))....))))).))).)))))))))).....


SIMILARITIES

miRBase dme-mir-4968: 3.0E-5 PMRD no hits microPC no hits

UniProt sp|Q6P767|PTTG_RAT: 8.0E-5 RFAM 8mir-598: 8.0E-6

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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