ABOUT THIS RECORDspecies: Schmidtea mediterranea
miRNA family: miR-4028
source: miRNEST
Taxonomy by NCBI:
Schmidtea mediterranea Schmidtea Dugesiidae Paludicola Tricladida Seriata Turbellaria Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTATTGATGTTGTTGTTGCTG miRNA* GTAGAGCAATCATTTATATCT mismatches: 2 bulges: 2 |
pre-miRNA
TAAATATTGACAGAAAACAACAGTAGAGCAATCATTTATATCTTTCAATATGGGGGGATGACGATATCACCGCAGCGCTCCTTGATTGATTATTATTATT
GATGTTGTTGTTGCTGTTGTTCTGTAGGTTTGATT
dot-bracket secondary structure
(((((....(((((..(((((((((((((((.((((.(((....(((((..(((((..((.((.......))))...)))))..))))).......))).
))))))))).)))))))))))))))..)))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TAAATATTGACAGAAAACAACAGTAGAGCAATCATTTATATCTTTCAATATGGGGGGATGACGATATCACCGCAGCGCTCCTTGATTGATTATTATTATT
GATGTTGTTGTTGCTGTTGTTCTGTAGGTTTGATT
dot-bracket secondary structure
(((((....(((((..(((((((((((((((.((((.(((....(((((..(((((..((.((.......))))...)))))..))))).......))).
))))))))).)))))))))))))))..)))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM mir-598: 0.0001 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
