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ABOUT THIS RECORD

ID: MNEST009970
species: Populus trichocarpa x Populus deltoides
miRNA family: MIRf312
source: miRNEST

Taxonomy by NCBI:
Populus trichocarpa x Populus deltoides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTATTAAACCCGGACCGGTCC

miRNA*
GCCGGGCCGGGTTTAATAACT

mismatches: 1
bulges: 0

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pre-miRNA
TGTTGCCACAGCCGGTCTTTTATTAAACCCGGACCGGTCCAGCCACCGGGTCGACCGGGTCCCGGGTCGACCCGCCGGGCCGGGCCGGGTTTAATAACTA
TGCCGTTGACTTGGC


dot-bracket secondary structure
....((((((((.(((...(((((((((((((.(((((((.((....(((((((((((...)).))))))))))).))))))).)))))))))))))...
.)))))))...))))



SIMILARITIES
miRBase no hits

PMRD ptc-miRf11676-akr: 4e-47

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: ptc-miRf11898-akr from PMRD (MNEST053720)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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