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ABOUT THIS RECORD
ID:
MNEST025655
species:
Xenopus laevis
miRNA family:
mir-15
source:
miRBase, original name:
xla-mir-15c
(
MI0008378
)
Taxonomy by NCBI:
Xenopus laevis
Xenopus
Xenopus
Xenopodinae
Pipidae
Pipoidea
Mesobatrachia
Anura
Batrachia
Amphibia
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGCAGCACATCATGGTTTGTA
miRNA*
CAGACCATTCTGAGCTGCCTCT
mismatches:
5
bulges:
0
View larger
pre-miRNA
CTTTGAGGTGATC
TAGCAGCACATCATGGTTTGTA
GAAACAAGGAGATA
CAGACCATTCTGAGCTGCCTCT
TGA
dot-bracket secondary structure
.............
..(((((.((..((((((((((
............))
))))))))..)).)))))....
...
SIMILARITIES
miRBase
xtr-mir-15c
:
1e-36
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-15: 5e-21
Identical with:
xtr-mir-15c
from miRBase (
MNEST025699
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Biasci D, Giudetti G, Barsacchi G, Andreazzoli M,
Unpublished (2008).
,