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ABOUT THIS RECORD

ID: MNEST025662
species: Xenopus laevis
miRNA family: mir-25
source: miRBase, original name: xla-mir-92a-2 (MI0008389)

Taxonomy by NCBI:
Xenopus laevis Xenopus Xenopus Xenopodinae Pipidae Pipoidea Mesobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATTGCACTTGTCCCGGCCTG

miRNA*
GGTGGGGATTTGTTGCACTACT

mismatches: 6
bulges: 1

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pre-miRNA
TCCTCTGTGGGTGGGGATTTGTTGCACTACTTGTGTTTTTATTAAAAGTATTGCACTTGTCCCGGCCTGTGGATGA

dot-bracket secondary structure
((.((((..(((.(((((..((.(((.(((((..((....))...))))).)))))..))))).)))..)))).))


SIMILARITIES
miRBase xtr-mir-92a-2: 6e-20

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-92: 1e-18

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Biasci D, Giudetti G, Barsacchi G, Andreazzoli M, Unpublished (2008).,




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