ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: mir-1
source: miRBase, original name: xtr-mir-1b (MI0004890)
SEQUENCE & STRUCTURE| miRNA TGGAATGTTAAGAAGTATGTA miRNA* CATACTTCTTTATATGCCCATA mismatches: 3 bulges: 1 |
pre-miRNA
GCACATACTTCTTTATATGCCCATACTGAATGAAAATGCTATGGAATGTTAAGAAGTATGTA
dot-bracket secondary structure
..(((((((((((.((((..(((((....((....))..))))).)))).))))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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GCACATACTTCTTTATATGCCCATACTGAATGAAAATGCTATGGAATGTTAAGAAGTATGTA
dot-bracket secondary structure
..(((((((((((.((((..(((((....((....))..))))).)))).))))))))))).
SIMILARITIES| miRBase xla-mir-1b: 5e-23 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1: 3e-28 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
