ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: mir-133
source: miRBase, original name: xtr-mir-133b (MI0004837)
SEQUENCE & STRUCTURE| miRNA TTGGTCCCCTTCAACCAGCTA miRNA* GCTGGTCAAACGGAACCAAGT mismatches: 4 bulges: 0 |
pre-miRNA
CTGCTATGGCTGGTCAAACGGAACCAAGTCCGTCTTCCTTAGAGGTTTGGTCCCCTTCAACCAGCTATTGCAGTA
dot-bracket secondary structure
((((.(((((((((..((.((.((((((.((.(((.....))))))))))).)).))..))))))))).))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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CTGCTATGGCTGGTCAAACGGAACCAAGTCCGTCTTCCTTAGAGGTTTGGTCCCCTTCAACCAGCTATTGCAGTA
dot-bracket secondary structure
((((.(((((((((..((.((.((((((.((.(((.....))))))))))).)).))..))))))))).))))..
SIMILARITIES| miRBase xla-mir-133b: 3e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-133: 2e-26 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
