ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: mir-147
source: miRBase, original name: gga-mir-147-1 (MI0003696)
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGTGCGGAAATGCTTCTGC miRNA* GGAATCACTTCTGCACAAACTTGACTACTG mismatches: 4 bulges: 10 |
pre-miRNA
AATCTAGTGGAATCACTTCTGCACAAACTTGACTACTGAAATCAGTGTGCGGAAATGCTTCTGCTACATT
dot-bracket secondary structure
....(((..(((.((.((((((((..........((((....)))))))))))).)).)))..)))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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AATCTAGTGGAATCACTTCTGCACAAACTTGACTACTGAAATCAGTGTGCGGAAATGCTTCTGCTACATT
dot-bracket secondary structure
....(((..(((.((.((((((((..........((((....)))))))))))).)).)))..)))....
SIMILARITIES| miRBase gga-mir-147-2: 3e-34 PMRD no hits microPC no hits | UniProt no hits RFAM mir-147: 5e-33 |
Identical with: gga-mir-147-2 from miRBase (MNEST025970) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
